PRATIK SHAH

Machine Learning Publications

arXiv:2011.05791 [stat.ML]

2021

Interpretable and synergistic deep learning for visual explanation and statistical estimations of segmentation of disease features from medical images

Sambuddha Ghosal and Shah P*

( *Senior author supervising research)

arXiv:2011.05791 [stat.ML]

SPIE Proceedings. DOI: 10.1117/12.2582303

2021

Automated end-to-end deep learning framework for classification and tumor localization from native non-stained pathology images

Akram Bayat, Anderson C, Shah P*

(*Senior author supervising research, Selected for Deep-dive spotlight session)

SPIE Proceedings. DOI: 10.1117/12.2582303

JAMA Network. DOI: 10.1001/jamanetworkopen.2020.5111

2020

Use of deep learning to develop and analyze computational hematoxylin and eosin staining of prostate core biopsy images for tumor diagnosis

Aman Rana, Lowe A, Lithgow M, Horback K, Janovitz T, Da Silva A, Tsai H, Shanmugam V, Bayat A, Shah P*

(*Senior author supervising research)

JAMA Network. DOI: 10.1001/jamanetworkopen.2020.5111

Published at 61st American Society of Hematology Annual Meeting, Orlando, FL

2020

Artificial neural networks detect and classify hematologic malignancies or solid tumors using electronic medical records prior to clinical diagnosis

Yujia Zhou, Barnes C, Magoc T, Lipori G, Shah P, Cogle CR

Published at 61st American Society of Hematology Annual Meeting, Orlando, FL

Published at 61st American Society of Hematology Annual Meeting, Orlando, FL
Clinical Pharmacology and Therapeutics. PMID: 32202650

2020

Data science in clinical pharmacology and drug development for improving health outcomes in patients

Pratik Shah, Peck R, Vamvakas S, van der Graaf, Piet H

Clinical Pharmacology and Therapeutics. PMID: 32202650

Proceedings of a Workshop, National Academies of Sciences, Engineering, and Medicine. Washington, DC: The National Academies Press. PMID: 31386317

2019

Improving cancer diagnosis and care: clinical application of computational methods in precision oncology

Pratik Shah

Proceedings of a Workshop, National Academies of Sciences, Engineering, and Medicine. Washington, DC: The National Academies Press. PMID: 31386317

Nature Digital Medicine. DOI: 10.1038/s41746-019-0148-3

2019

Artificial intelligence and machine learning in clinical development: a translational perspective

Pratik Shah* et al.

(*Corresponding author)

Nature Digital Medicine. DOI: 10.1038/s41746-019-0148-3

Trends in Pharmacological Sciences. PMID: 31326235

2019

Artificial Intelligence for clinical trial design

Stefan Harrer, Shah P, Antony P, Hu J

Trends in Pharmacological Sciences. PMID: 31326235

41st IEEE International Engineering in Medicine and Biology Conference. DOI: 10.1109/EMBC.2019.8857965

2019

Automated process incorporating machine learning segmentation and correlation of oral diseases with systemic health

Gregory Yauney, Rana A, Javia P, Wong L, Muftu A, Shah P*

(*Senior author supervising research)

41st IEEE International Engineering in Medicine and Biology Conference. DOI: 10.1109/EMBC.2019.8857965

Proceedings of the 3rd Machine Learning for Healthcare Conference. PMLR 85:161-226

2018

Reinforcement learning with action-derived rewards for chemotherapy and clinical trial dosing regimen selection

Gregory Yauney, Shah P*

(*Senior author supervising research)

Proceedings of the 3rd Machine Learning for Healthcare Conference. PMLR 85:161-226

17th IEEE International Conference of Machine Learning and Applications. DOI: 10.1109/ICMLA.2018.00133

2018

Computational histological staining and destaining of prostate core biopsy RGB images with generative adversarial neural networks

Aman Rana, Yauney G, Lowe A, Shah P*

(*Senior author supervising research)

17th IEEE International Conference of Machine Learning and Applications. DOI: 10.1109/ICMLA.2018.00133

17th IEEE International Conference of Machine Learning and Applications. DOI: 10.1109/ICMLA.2018.00097

2018

Machine learning algorithms for classification of microcirculation images from septic and non-septic patients

Perikumar Javia, Rana A, Shapiro NI, Shah P*

(*Senior author supervising research)

17th IEEE International Conference of Machine Learning and Applications. DOI: 10.1109/ICMLA.2018.00097

17<sup>th</sup> annual IEEE International Conference on BioInformatics and BioEngineering. DOI: 10.1109/BIBE.2017.00-37

2017

Convolutional neural network for combined classification of fluorescent biomarkers and expert annotations using white light images

Gregory Yauney, Angelino K, Edlund D, Shah P*

(*Senior author supervising research, Selected for oral presentation)

17th annual IEEE International Conference on BioInformatics and BioEngineering. DOI: 10.1109/BIBE.2017.00-37

IEEE-NIH 2017 Special Topics Conference on Healthcare Innovations and Point-of-Care Technologies. DOI: 10.1109/HIC.2017.8227605

2017

Automated segmentation of gingival diseases from oral images

Aman Rana, Yauney G, Wong L, Muftu A, Shah P*

(*Senior author supervising research)

IEEE-NIH 2017 Special Topics Conference on Healthcare Innovations and Point-of-Care Technologies. DOI: 10.1109/HIC.2017.8227605